BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C01LP1|AL427727
(1030 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1450 1867 0.0
>3x_Contig1450
Length = 9648
Score = 1867 bits (933), Expect = 0.0
Identities = 998/1023 (97%), Gaps = 5/1023 (0%)
Strand = Plus / Minus
Query: 13 atctggagasagtataatgatgactcagttacagaggtgccacaatcggaagtattcaac 72
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 atctggaggaagtataatgatgactcagttacagaggtgccacaatcggaagtattcaac 1350
Query: 73 ttcacggagggtaatacggccactccatactttttggtctacgtccgtgaaggtcaagaa 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 ttcacggagggtaatacggccactccatactttttggtctacgtccgtgaaggtcaagaa 1290
Query: 133 caagaaactatcgaaccattgaaacgaattcttcaacaacaggagtaacccgtgtcgctc 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 caagaaactatcgaaccattgaaacgaattcttcaacaacaggagtaacccgtgtcgctc 1230
Query: 193 ttaaagtggcataaatatgatttacattatattaattaavagatagatcagtatgtaatg 252
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1229 ttaaagtggcataaatatgatttacattatattaattaaaagatagatcagtatgtaatg 1170
Query: 253 caggaattggtaaaatttataagatctggcgttcagttaggcttactgtgcggatactat 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 caggaattggtaaaatttataagatctggcgttcagttaggcttactgtgcggatactat 1110
Query: 313 cttcgattcaatatccacatgtgagggtaaattgattttcgcmaggcaggcaggagttct 372
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1109 cttcgattcaatatccacatgtgagggtaaattgattttcgcaaggcaggcaggagttct 1050
Query: 373 taattagttagttaccttgatctaatttgaaaaanaaaaacatcaaaatgaaaaataact 432
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1049 taattagttagttaccttgatctaatttgaaaaaaaaaaacatcaaaatgaaaaataact 990
Query: 433 aactgattttgatcaaacctagtttatatctatggtgaatgattttnaagatttactctt 492
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 989 aactgattttgatcaaacctagtttatatctatggtgaatgattttaaagatttactctt 930
Query: 493 cgtgtcacaattggctttmagtcattaggtttgacttgaaggtaggattggmattctgtt 552
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 929 cgtgtcacaattggctttaagtcattaggtttgacttgaaggtaggattggaattctgtt 870
Query: 553 atccgacaattggactgtgacttgtcaagaagtgaacttgcmaagttgcacgccgaammm 612
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 869 atccgacaattggactgtgacttgtcaagaagtgaacttgcaaagttgcacgccgaaaaa 810
Query: 613 mtagggtaammcttcatcatgtctttacagcgtcgccgagttaataaaggtgatacaacg 672
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atagggtaaaaattcatcatgtctttacagcgtcgccgagttaataaaggtgatacaacg 750
Query: 673 gaatcaatccctcaaatagataatgagcatgatcataagattgtatatgacgagcaagag 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gaatcaatccctcaaatagataatgagcatgatcataagattgtatatgacgagcaagag 690
Query: 733 gcgaaactaagggacaacactagtgttcctaagttgaccttaatggaggaagttttgttg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gcgaaactaagggacaacactagtgttcctaagttgaccttaatggaggaagttttgttg 630
Query: 793 atgggactaaaggataaacagggatatttatcattctggaacgataatatctcgtacgcc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atgggactaaaggataaacagggatatttatcattctggaacgataatatctcgtacgcc 570
Query: 853 ctacgtgggtgcatcttgatagaactagcgttacgaggtaagattagatgtgttgatgat 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctacgtgggtgcatcttgatagaactagcgttacgaggtaagattagatgtgttgatgat 510
Query: 913 ccagcaagaaagagatacgatgtcagtgagagattaattgaggt-mtagacgg-agtwaa 970
||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||
Sbjct: 509 ccagcaagaaagagatacgatgtcagtgagagattaattgaagtcatagacggaagtaaa 450
Query: 971 actggcgaggtcttacttgatgaaag-ttatctttaatg-agaacgatcc-ccmacttca 1027
|||||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||
Sbjct: 449 actggcgaggtcttacttgatgaaagtttatctttaatgaagaacgatccaccaacttca 390
Query: 1028 att 1030
|||
Sbjct: 389 att 387
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6508
Number of Sequences: 1807
Number of extensions: 6508
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 1030
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1014
effective length of database: 10,329,639
effective search space: 10474253946
effective search space used: 10474253946
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)